Taipei Medical University

Shih Lab for Non-coding RNA Research

Jing-Wen Shih
https://hub.tmu.edu.tw/en/persons/jing-wen-shih

Research Field

Biology

Introduction

Dr. Shih has received his doctoral and postdoctoral training in molecular RNA biology. Currently, he is an associate professor at the Graduate Institute of Cancer Biology and Drug Discovery at Taipei Medical University (TMU), focusing on studying oncogenic long non-coding RNAs (lncRNAs) and their translational applications. He is also a member of the TMU Research Center of Cancer Translational Medicine.

 

Academic Experience

  • 2018-2022   Assistant Professor, Graduate Institute of Cancer Biology and Drug Discovery, College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan
  • 2013-2018   Adjunct Assistant Professor, Ph.D. Program for Translational Medicine, College of Medical Science and Technology, Taipei Medical University, Taipei, Taiwan
  • 2013-2014   Research Scholar (supported by National Science Council of Taiwan), Ph.D. Program for Translational Medicine, Taipei Medical University, Taipei, Taiwan
  • 2012-2013   Visiting Scholar, UC Davis Comprehensive Cancer Center, Sacramento, USA
  • 2011-2012    Post-Doctoral Fellow, Department of Biological Science and Technology, National Chiao Tung University, Taiwan
  • 2007-2011    Post-Doctoral Fellow, Institute of Biochemistry and Molecular Biology, National Yang-Ming University, Taiwan 

Long non-coding RNAs (lncRNAs) represent a new and under-studied class of transcripts with emerging functions in gene regulation and critical links to human health. Towards a molecular understanding of lncRNA function in tumor progression, our lab is currently integrating a set of biochemical, bioinformatics, and molecular biology strategies to characterize lncRNA species, elucidate their action modes, and explore their clinical applicability.

I. LncRNAs in response to tumor hypoxia
Hypoxia is a common feature of the tumor microenvironment, profoundly affects gene expression, and is tightly associated with cancer progression. It is now known that lncRNAs play critical roles in the signaling networks mediating the response of cancer cells to hypoxia, such as metabolic reprogramming, invasion, and metastasis. We are using a variety of approaches to identify and characterize lncRNAs involved in this process.

II. RNA-based diagnostic and therapeutic strategies for cancer
In clinical practice, it has been shown that circulating noncoding RNAs could serve as potential disease biomarkers with high specificity, sensitivity, and noninvasive characteristics, whereas a series of lncRNAs hold great potential to be developed as specific targets for therapy. In collaboration with clinical physicians, our group is implementing in-depth studies to validate the clinical relevance of the oncogenic circulating lncRNAs we’ve identified, hoping that these efforts could help identify novel biomarkers and therapeutic strategies beneficial to cancer patients.


Research Topics
  • RNA biology, metabolism & clinical translation 
  • RNA-mediated stress response signaling and network
  • Adaptation of cancer cells to microenvironmental stresses
  • RNA-based biomarker & therapeutics

Honor
  • 2022     Outstanding Teaching Award, College of Medical Science and Technology, Taipei Medical University, Taiwan
  • 2018     Postdoctoral Academic Publication Award, Ministry of Science and Technology, Taiwan 
  • 2012     Postdoctoral Research Abroad Program, National Science Council, Taiwan 
  • 2008    14th Excellent Thesis Award, Liver Disease Prevention & Treatment Research Foundation, Taiwan
  • 2007    Oral Presentation Award (2nd Place), the Symposium on Host-Microbes Interactions, the Taiwan Society for Biochemistry and Molecular Biology, Taiwan
  • 1999      Professor Chung-Hsiang Kuo Memorial Scholarship, Department of Biology, National Taiwan Normal University, Taiwan 

Educational Background
  • 2001-2007   Ph.D., Biochemistry and Molecular Biology, Institute of Biochemistry and Molecular Biology, National Yang-Ming University, Taipei, Taiwan
  • 1999-2001    M.S., Pharmaceutical Sciences, Institute of Biopharmaceutical Sciences, National YangMing University, Taipei, Taiwan
  • 1995-1999    B.S., Biology, Department of Biology, National Taiwan Normal University, Taipei, Taiwan

2 Vacancies

Job Description

This program focuses on exploring RNA-based molecular mechanisms in carcinogenesis and their potential in clinical applications. The training will include specialized knowledge of RNA and tumor biology, identification and design of RNA-based biomarkers and therapeutics, critical thinking, and empirical research capabilities. The internships will involve conducting research literature reviews and experiments related to research projects. The participants will receive training in laboratory safety and experimental skills. Additional learning activities in data analysis and laboratory presentation skills will also be included.

Benefits:

  • Opportunity to work on cutting-edge RNA-associated research tools and techniques.
  • Access to state-of-the-art transcriptomic equipment and analytic software
  • Collaborative work environment with experts in the field
  • Participants that have completed the training with excellent research capabilities will be eligible for funding support to study in TMU’s Master’s Program or Ph.D. program of Cancer

Preferred Intern Education Level

Students pursuing bachelor's, master's, and Ph.D. degrees in molecular biology, life and biomedical sciences, or a biology-related field.

Skill sets or Qualities

  • A profound understanding of RNA biology.
  • Experience with cell culture and molecular biology research.
  • Effective communication skills in English, both written and verbal.
  • Teamwork mindset