Molecular Theranostic Laboratory
Research Field
Anup Pandith received his B.Sc. (Honors) in Applied Chemistry (2009) and an M.Sc. in Industrial Chemistry (2011) from Kuvempu University, India. He worked as a research associate at Syngene Int. Ltd., in Bangalore and as a junior research fellow with the late Professor A. Sri Krishna at the Indian Institute of Science (IISc), Bangalore (2011–2013). He finished his doctoral studies with Prof. Dr. Hong-Seok Kim at the Department of Applied Chemistry, Kyungpook National University, Daegu, Korea (2017). He worked as a post-doctoral fellow with Dr. Young Jun Seo in the Department of Chemistry, Jeonbuk National University, Jeonju, South Korea (2017-2019). Later he worked as a tenured Research Professor at Jeonbuk National University (2019-2020) and Kyung-Hee University, Seoul, South Korea (2020-2022). Since May 2022, he has been working as an Assistant Professor at the College of Biomedical Engineering, Taipei Medical University, Taiwan. His research concerns the development of novel non-classical chromo-fluorogenic functional materials photo physical evaluations and their applications in biomolecular (2o metabolites, proteins, DNA/RNA) recognition-aided therapies (chemotherapy, PDT, PTT and combinational therapy).
Anup's research vision is to contribute to the field of biomedical engineering, in particular the development of new-generation diagnostics (proteins, nucleic acids, amino acids, biogenic amines, and disease-related secondary metabolites etc.) and therapeutic tools, by a thorough understanding of the translational use of new chromo-fluorogenic materials and their supramolecular assemblies for sustained molecular theranostics. The research strategy starts with the development of new nonclassical materials synthesis and ends with its translational applications in biomedical science. In this approach, we synthesize various functional materials viz., organic, organic-inorganic hybrids [metal organic frameworks (MOF’s), metal complexes, ensembles etc.], polymers (organic/inorganic) and nanocomposites (liposomes, polymersomes, mesoporous nanomaterials) that can be applicable for opto-bioanalytical and therapeutic applications.
Rationale: The optimal levels of cellular metabolites (viz., ions, molecules) and biochemically fully functional proteins, and nucleic acids are essential components for the healthy survival of cells. Abnormal metabolites level or anomalous up/down-regulation of nucleic acids/proteins in the cellular system, either through the external stimulus or organelle dysfunction, leads to fatal disease. Hence disease states can be identified either by selective targeting of ions, secondary metabolites, or biomolecules. It is always desirable and economical to implement the label-free method to recognize the ions (viz., H+, OH-, Ca2+, Cu2+, Fe2+/3+, Zn2+ etc.) and small molecules (viz., lipids, vitamins, thiols, ROS/RNS etc.) in physiological conditions especially in the initial stage of disease screening (metabolic imaging). Thereafter, depending on the results, a labelled method (post-synthetic modifications, biorthogonal labelling, fluorescent-aptamers) can be implemented for accurate disease diagnosis at the biomolecular level (nucleic acid and proteins level). The initial (label-free) and advanced level (labelled) disease state identifications rationale would be helpful to avoid unnecessary wastage of research resources and time. Upon a clear understanding of the disease state in in-vitro conditions depending on the need, treatment (chemotherapy, photodynamic therapy, photothermal therapy or combination therapy) will be provided to cure the disease/abnormalities in suitable zebrafish and mice models for potentially efficient translational applications. Since we will study from fundamental aspects (organic, inorganic and nano-composites synthesis) to diverse applications (recognitions and therapeutics), will have a broad biomedical impact and applications. Beyond that, we will also evaluate how those molecules will specifically interact with a particular target/analyte even in the presence of structurally similar biomolecules (crystallography, NMR, HPLC, MALDI-TOF & computational tools) in cells along with their metabolism (until renal excretion).
Bioanalytical Chemistry
Chemical Biology
Supramolecular Chemistry
Molecular Diagnostics
Phototheranostics
Computational Chemistry
Biophysics
Awards
- 2nd Rank in M.Sc. Industrial Chemistry in 2011 from Kuvempu University.
- Gold Medal in the Social and Scientific Foundation Examination organized by Bangalore University in 2003.
- KHS Doctoral Studies Scholarship from Kyungpook National University, Daegu, South Korea (2014~2017).
- Best Research Poster Award from the Korean Chemical Society conference, Organic-Supramolecular Chemistry division held in Gangwon province, South Korea (Aug. 2016).
- Outstanding Research Poster Award from Korean Chemical Society-120th general meeting, held in Gwangju, South Korea (Oct. 2017).
Recognitions
- Associate Editorial Board Member in Current Analytical Chemistry (Bentham Science Publisher) https://benthamscience.com/journals/current-analytical-chemistry/ since 2020.
- Reviewer in various internationally reputed peer-reviewed journals such as Elsevier, Taylor & Francis, RSC, Springer-Nature, Bentham Science, WILEY, etc.
- 2017 PhD, Department of Applied Chemistry, Kyungpook National University
- 2011 MS, Department of Industrial Chemistry, Kuvempu University
- 2009 BS, Department of Applied Chemistry, Kuvempu University
1 Vacancy
Job Description
In this internship program, the expected candidate will synthesize a new fluorescent probe and analyze its photophysical properties. Thereafter rationally synthesized fluorescent probe opto-analytical capabilities towards peroxynitrite will be documented under physiological conditions and AD cell models.
Preferred Intern Education Level
Currently enrolled M.Sc./MS students from chemical science and allied subjects, such as Organic Chemistry/General Chemistry/Pharmaceutical Chemistry/Medicinal Chemistry/Industrial Chemistry/Chemical Engineering/Material Science and Engineering/Biomedical Engineering/Materials Chemistry/Nanotechnology.
Or
Currently enrolled Ph.D. students from chemical science and allied subjects such as Organic Chemistry/General Chemistry/Pharmaceutical Chemistry/Medicinal Chemistry/Industrial Chemistry/Chemical Engineering/Material Science and Engineering/Biomedical Engineering/Materials Chemistry/Nanotechnology.
Skill sets or Qualities
The expected candidate should have strong motivation toward synthetic chemistry and be willing to learn its translational application in biomedical science. Basic knowledge of synthetic organic chemistry, such as asymmetric synthesis, catalysis and peptide synthesis, are required. Basic knowledge of cell culture and bioimaging are necessary.
1 Vacancy
Job Description
In this 3 months internship program expected candidate will perform density functional theory (DFT), time-dependent density function theory (TD-DFT), to identify the distribution of frontier molecular orbitals (FMOs), band gap, simulate the UV-Vis absorption and fluorescence spectra, triplet state energy and two-photon absorption cross-section of new two-photon fluorescent materials. Also, DFT-based energy minimized structure utilization in molecular docking (Amyloid beta) and molecular dynamics.
Preferred Intern Education Level
Currently enrolled M.Sc./MS students from Physical science and allied subjects, such as Physics, Quantum Physics, Materials and Molecular Modelling, Biophysics, Computational Chemistry, Quantum Mechanics.
Or
Currently enrolled Ph.D. students from Physical science and allied subjects, such as Physics, Quantum Physics, Computational Chemistry, Quantum Mechanics, Materials and Molecular Modelling and Biophysics.
Skill sets or Qualities
The expected candidate should have experience in DFT, TD-DFT, Molecular docking and Molecular dynamics studies.